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Installation
Getting Started
User Guide
Terminology & Notation
Examples
API Reference
Choose version
GitHub
Section Navigation
Block Structures
fips.Block
fips.Block.to_series
fips.Block.to_xarray
fips.Block.name
fips.Block.data
fips.Block.index
fips.Block.copy
fips.Block.to_series
fips.Block.to_numpy
fips.Block.to_xarray
fips.Block.xs
fips.Block.reindex
fips.Block.round_index
fips.Block.from_file
fips.Block.to_file
fips.MatrixBlock
fips.MatrixBlock.col_block
fips.MatrixBlock.row_block
fips.MatrixBlock.to_frame
fips.MatrixBlock.name
fips.MatrixBlock.data
fips.MatrixBlock.row_block
fips.MatrixBlock.col_block
fips.MatrixBlock.index
fips.MatrixBlock.columns
fips.MatrixBlock.shape
fips.MatrixBlock.values
fips.MatrixBlock.copy
fips.MatrixBlock.to_frame
fips.MatrixBlock.to_numpy
fips.MatrixBlock.xs
fips.MatrixBlock.reindex
fips.MatrixBlock.round_index
fips.MatrixBlock.from_file
fips.MatrixBlock.to_file
fips.MatrixBlock.is_sparse
fips.MatrixBlock.to_sparse
fips.MatrixBlock.to_dense
Multi-Block Structures
fips.Vector
fips.Vector.blocks
fips.Vector.data
fips.Vector.to_xarray
fips.Vector.name
fips.Vector.data
fips.Vector.index
fips.Vector.shape
fips.Vector.values
fips.Vector.blocks
fips.Vector.copy
fips.Vector.to_series
fips.Vector.to_numpy
fips.Vector.to_xarray
fips.Vector.__getitem__
fips.Vector.xs
fips.Vector.reindex
fips.Vector.round_index
fips.Vector.from_file
fips.Vector.to_file
fips.Matrix
fips.Matrix.blocks
fips.Matrix.data
fips.Matrix.scale
fips.Matrix.to_xarray
fips.Matrix.name
fips.Matrix.data
fips.Matrix.index
fips.Matrix.columns
fips.Matrix.shape
fips.Matrix.values
fips.Matrix.copy
fips.Matrix.to_frame
fips.Matrix.to_numpy
fips.Matrix.__getitem__
fips.Matrix.xs
fips.Matrix.reindex
fips.Matrix.round_index
fips.Matrix.scale
fips.Matrix.__add__
fips.Matrix.from_file
fips.Matrix.to_file
fips.Matrix.is_sparse
fips.Matrix.to_sparse
fips.Matrix.to_dense
Operators
fips.ForwardOperator
fips.ForwardOperator.obs_index
fips.ForwardOperator.state_index
fips.ForwardOperator.convolve
fips.ForwardOperator.name
fips.ForwardOperator.data
fips.ForwardOperator.index
fips.ForwardOperator.obs_index
fips.ForwardOperator.columns
fips.ForwardOperator.state_index
fips.ForwardOperator.shape
fips.ForwardOperator.values
fips.ForwardOperator.blocks
fips.ForwardOperator.copy
fips.ForwardOperator.to_frame
fips.ForwardOperator.to_numpy
fips.ForwardOperator.xs
fips.ForwardOperator.reindex
fips.ForwardOperator.round_index
fips.ForwardOperator.from_file
fips.ForwardOperator.to_file
fips.ForwardOperator.is_sparse
fips.ForwardOperator.to_sparse
fips.ForwardOperator.to_dense
fips.ForwardOperator.convolve
fips.operators.convolve
Covariance Matrices
fips.CovarianceMatrix
fips.CovarianceMatrix.variances
fips.CovarianceMatrix.force_symmetry
fips.CovarianceMatrix.name
fips.CovarianceMatrix.data
fips.CovarianceMatrix.index
fips.CovarianceMatrix.columns
fips.CovarianceMatrix.shape
fips.CovarianceMatrix.values
fips.CovarianceMatrix.variances
fips.CovarianceMatrix.blocks
fips.CovarianceMatrix.copy
fips.CovarianceMatrix.to_frame
fips.CovarianceMatrix.to_numpy
fips.CovarianceMatrix.xs
fips.CovarianceMatrix.reindex
fips.CovarianceMatrix.round_index
fips.CovarianceMatrix.from_file
fips.CovarianceMatrix.to_file
fips.CovarianceMatrix.is_sparse
fips.CovarianceMatrix.to_sparse
fips.CovarianceMatrix.to_dense
fips.CovarianceMatrix.force_symmetry
fips.covariance.ErrorComponent
fips.covariance.ErrorComponent.name
fips.covariance.ErrorComponent.variances
fips.covariance.ErrorComponent.build
fips.covariance.DiagonalError
fips.covariance.DiagonalError.build
fips.covariance.BlockDecayError
fips.covariance.BlockDecayError.corr_func
fips.covariance.BlockDecayError.groupers
fips.covariance.BlockDecayError.build
fips.covariance.KroneckerError
fips.covariance.KroneckerError.marginal_kernels
fips.covariance.KroneckerError.build
fips.covariance.ErrorComponent.build
fips.covariance.ErrorComponent.__add__
fips.covariance.CovarianceBuilder
fips.covariance.CovarianceBuilder.components
fips.covariance.CovarianceBuilder.build
fips.covariance.CovarianceBuilder.build
fips.covariance.CovarianceBuilder.__add__
fips.covariance.CovarianceBuilder.__radd__
Inverse Problem
fips.InverseProblem
fips.InverseProblem.averaging_kernel
fips.InverseProblem.constant
fips.InverseProblem.desroziers
fips.InverseProblem.estimator
fips.InverseProblem.forward_operator
fips.InverseProblem.kalman_gain
fips.InverseProblem.modeldata_mismatch
fips.InverseProblem.n_obs
fips.InverseProblem.n_state
fips.InverseProblem.obs
fips.InverseProblem.obs_index
fips.InverseProblem.posterior
fips.InverseProblem.posterior_error
fips.InverseProblem.posterior_obs
fips.InverseProblem.prior
fips.InverseProblem.prior_error
fips.InverseProblem.prior_obs
fips.InverseProblem.prior_obs_error
fips.InverseProblem.state_index
fips.InverseProblem.get_block
fips.InverseProblem.solve
fips.InverseProblem.obs
fips.InverseProblem.prior
fips.InverseProblem.forward_operator
fips.InverseProblem.prior_error
fips.InverseProblem.modeldata_mismatch
fips.InverseProblem.constant
fips.InverseProblem.estimator
fips.InverseProblem.solve
fips.InverseProblem.posterior
fips.InverseProblem.posterior_error
fips.InverseProblem.prior_obs
fips.InverseProblem.posterior_obs
fips.InverseProblem.kalman_gain
fips.InverseProblem.averaging_kernel
fips.InverseProblem.get_block
fips.InverseProblem.from_file
fips.InverseProblem.to_file
Estimators
fips.Estimator
fips.Estimator.A
fips.Estimator.c
fips.Estimator.desroziers
fips.Estimator.DOFS
fips.Estimator.H
fips.Estimator.K
fips.Estimator.n_x
fips.Estimator.n_z
fips.Estimator.R2
fips.Estimator.reduced_chi2
fips.Estimator.RMSE
fips.Estimator.S_0
fips.Estimator.S_hat
fips.Estimator.S_y0
fips.Estimator.S_z
fips.Estimator.U_red
fips.Estimator.uncertainty_reduction
fips.Estimator.x_0
fips.Estimator.x_hat
fips.Estimator.y_0
fips.Estimator.y_hat
fips.Estimator.z
fips.Estimator.cost
fips.Estimator.forward
fips.Estimator.leverage
fips.Estimator.residual
fips.Estimator.n_z
fips.Estimator.n_x
fips.Estimator.z
fips.Estimator.x_0
fips.Estimator.H
fips.Estimator.S_0
fips.Estimator.S_z
fips.Estimator.c
fips.Estimator.cost
fips.Estimator.forward
fips.Estimator.residual
fips.Estimator.leverage
fips.Estimator.x_hat
fips.Estimator.S_hat
fips.Estimator.y_hat
fips.Estimator.y_0
fips.Estimator.K
fips.Estimator.A
fips.Estimator.reduced_chi2
fips.Estimator.R2
fips.Estimator.RMSE
fips.Estimator.uncertainty_reduction
fips.Estimator.U_red
fips.estimators.BayesianSolver
fips.estimators.BayesianSolver.gamma
fips.estimators.BayesianSolver.S_hat
fips.estimators.BayesianSolver.x_hat
fips.estimators.BayesianSolver.cost
fips.estimators.BayesianSolver.cost
fips.estimators.BayesianSolver.x_hat
fips.estimators.BayesianSolver.S_hat
Pipeline
fips.InversionPipeline
fips.InversionPipeline.config
fips.InversionPipeline.estimator
fips.InversionPipeline.aggregate_obs_space
fips.InversionPipeline.filter_state_space
fips.InversionPipeline.get_constant
fips.InversionPipeline.get_forward_operator
fips.InversionPipeline.get_inputs
fips.InversionPipeline.get_modeldata_mismatch
fips.InversionPipeline.get_obs
fips.InversionPipeline.get_prior
fips.InversionPipeline.get_prior_error
fips.InversionPipeline.run
fips.InversionPipeline.get_obs
fips.InversionPipeline.get_prior
fips.InversionPipeline.get_forward_operator
fips.InversionPipeline.get_prior_error
fips.InversionPipeline.get_modeldata_mismatch
fips.InversionPipeline.get_constant
fips.InversionPipeline.filter_state_space
fips.InversionPipeline.aggregate_obs_space
fips.InversionPipeline.get_inputs
fips.InversionPipeline.run
Base Classes
fips.base.Pickleable
fips.base.Pickleable.from_file
fips.base.Pickleable.to_file
fips.base.Structure
fips.base.Structure.data
fips.base.Structure.index
fips.base.Structure.name
fips.base.Structure.shape
fips.base.Structure.values
fips.base.Structure.copy
fips.base.Structure.reindex
fips.base.Structure.round_index
fips.base.Structure.to_numpy
fips.base.Structure.xs
fips.base.Structure1D
fips.base.Structure1D.data
fips.base.Structure1D.name
fips.base.Structure1D.to_series
fips.base.Structure2D
fips.base.Structure2D.columns
fips.base.Structure2D.data
fips.base.Structure2D.is_sparse
fips.base.Structure2D.name
fips.base.Structure2D.values
fips.base.Structure2D.to_dense
fips.base.Structure2D.to_frame
fips.base.Structure2D.to_sparse
fips.base.SingleBlockMixin
fips.base.MultiBlockMixin
fips.base.MultiBlockMixin.blocks
Utilities
Aggregators
fips.aggregators.integrate_over_time_bins
fips.aggregators.ObsAggregator
fips.aggregators.ObsAggregator.blocks
fips.aggregators.ObsAggregator.by
fips.aggregators.ObsAggregator.freq
fips.aggregators.ObsAggregator.func
fips.aggregators.ObsAggregator.level
fips.aggregators.ObsAggregator.apply
fips.aggregators.ObsAggregator.apply
Filters
fips.filters.enough_obs_per_interval
fips.filters.select_intervals_with_min_obs
Index utilities
fips.indexes.apply_to_index
fips.indexes.assign_block
fips.indexes.outer_align_levels
fips.indexes.overlaps
fips.indexes.resolve_axes
fips.indexes.round_index
fips.indexes.to_numeric
Kernels
fips.kernels.ConstantCorrelation
fips.kernels.RaggedTimeDecay
fips.kernels.GridTimeDecay
fips.kernels.GridSpatialDecay
Metrics
fips.metrics.haversine_matrix
fips.metrics.time_diff_matrix
Visualization
fips.visualization.plot_error_norm
fips.visualization.plot_comparison
fips.visualization.compute_credible_interval
Problems
Flux Inversion
fips.problems.flux.FluxProblem
fips.problems.flux.FluxProblem.background
fips.problems.flux.FluxProblem.concentration_error
fips.problems.flux.FluxProblem.concentrations
fips.problems.flux.FluxProblem.enhancement
fips.problems.flux.FluxProblem.jacobian
fips.problems.flux.FluxProblem.plot
fips.problems.flux.FluxProblem.posterior_concentrations
fips.problems.flux.FluxProblem.posterior_flux_error
fips.problems.flux.FluxProblem.posterior_fluxes
fips.problems.flux.FluxProblem.prior_concentration_error
fips.problems.flux.FluxProblem.prior_concentrations
fips.problems.flux.FluxProblem.prior_flux_error
fips.problems.flux.FluxProblem.prior_fluxes
fips.problems.flux.FluxProblem.solve
fips.problems.flux.FluxProblem.prior
fips.problems.flux.FluxProblem.obs
fips.problems.flux.FluxProblem.estimator
fips.problems.flux.FluxProblem.solve
fips.problems.flux.FluxProblem.get_block
fips.problems.flux.pipeline.FluxInversionPipeline
fips.problems.flux.pipeline.FluxInversionPipeline.filter_state_space
fips.problems.flux.pipeline.FluxInversionPipeline.run
fips.problems.flux.pipeline.FluxInversionPipeline.summarize
fips.problems.flux.pipeline.FluxInversionPipeline.problem
fips.problems.flux.pipeline.FluxInversionPipeline.estimator
fips.problems.flux.pipeline.FluxInversionPipeline.filter_state_space
fips.problems.flux.pipeline.FluxInversionPipeline.run
fips.problems.flux.pipeline.FluxInversionPipeline.summarize
fips.problems.flux.visualization.FluxPlotter
fips.problems.flux.visualization.FluxPlotter.inversion
fips.problems.flux.visualization.FluxPlotter.concentrations
fips.problems.flux.visualization.FluxPlotter.fluxes
fips.problems.flux.visualization.FluxPlotter.fluxes
fips.problems.flux.visualization.FluxPlotter.concentrations
API Reference
Covariance Matrices
fips.covariance.ErrorComponent
fips.covariance.ErrorComponent.name
fips.covariance.ErrorComponent.name
#
ErrorComponent.
name
:
str
#
Name of the error component.
On this page
ErrorComponent.name
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